Uses of Interface
org.jbei.ice.storage.DataModel

Packages that use DataModel

Package	Description
org.jbei.ice.lib.access	Permissions related classes.
org.jbei.ice.storage	Database access classes.
org.jbei.ice.storage.hibernate
org.jbei.ice.storage.model	Data models for ice objects.

Uses of DataModel in org.jbei.ice.lib.access

Classes in org.jbei.ice.lib.access with type parameters of type DataModel

Modifier and Type	Class and Description
class	Authorization<T extends DataModel> Used in instances where access permissions are to be enforced.

Uses of DataModel in org.jbei.ice.storage

Classes in org.jbei.ice.storage with type parameters of type DataModel

Modifier and Type	Interface and Description
interface	IRepository<T extends DataModel> Interface for the persistent layer

Uses of DataModel in org.jbei.ice.storage.hibernate

Classes in org.jbei.ice.storage.hibernate with type parameters of type DataModel

Modifier and Type	Class and Description
class	HibernateRepository<T extends DataModel> Parent abstract class for Hibernate Persistence

Uses of DataModel in org.jbei.ice.storage.model

Classes in org.jbei.ice.storage.model that implement DataModel

Modifier and Type	Class and Description
class	Account Store the account information for a single user.
class	AccountPreferences Store preferences for a user for an Account object.
class	AnnotationLocation Store the basepair location annotation for a SequenceFeature object.
class	ApiKey
class	ArabidopsisSeed Store Arabidopsis Seed specific fields.
class	Attachment Store information about attachments.
class	Audit Audit object for keep track of actions affecting entries.
class	BulkUpload Saved draft of bulk imports.
class	Comment Store comments about an Entry object, with the associated .lib.account.model.Account.
class	Configuration Site wide configuration values.
class	Entry Entry class is the most important class in gd-ice.
class	Experiment Storage entity for experimental data
class	Feature Represents a unique sequence annotation known to this instance of gd-ice.
class	FeatureCurationModel
class	Folder Encapsulates the notion of a collection of Entrys Each folder has an owner.
class	Group Aggregate users into groups.
class	Link Store url link information.
class	ManuscriptModel
class	Message Encapsulates system and user messages which can be sent to groups or individuals.
class	Parameter Stores key-value information for Entry.
class	Part Store Part specific fields.
class	Permission Permission object for storing permissions related to either folders or entries on an account or group basis
class	Plasmid Store Plasmid specific fields.
class	Preference Entity for storing user preferences.
class	RemoteAccessModel Stores access information for remote shares
class	RemoteClientModel Abstract notion of a client.
class	RemotePartner Represents a remote entity that this ice instance knows about and could potentially communicate with or allow communications from Field Descriptions: NAME: Name of the remote instance for display purposes. URL: Unique resource locator for the partner.
class	RemoteShareModel Stores shares for entries or folders.
class	Request Storage data model for sample requests
class	Sample Store Sample information.
class	SelectionMarker Represents a selection marker for entry.
class	Sequence Stores the unique sequence for an Entry object.
class	SequenceFeature Stores the sequence annotation information, and associates Feature objects to a Sequence object.
class	SequenceFeatureAttribute Store genbank style attributes.
class	ShotgunSequence
class	Storage Store sample storage location information as well as the hierarchical structure information.
class	Strain Store Strain specific fields.
class	TraceSequence Store sequence trace file information.
class	TraceSequenceAlignment Store computed trace alignment information.