Serialized Form (ice 5.3.1 API)

Package org.jbei.auth
- Class org.jbei.auth.MemoryKeyTable extends HashMap<String,Key> implements Serializable
  
  serialVersionUID:
  
  460597881793784549L
Package org.jbei.ice.lib.access
- Class org.jbei.ice.lib.access.AuthorizationException extends RuntimeException implements Serializable
- Class org.jbei.ice.lib.access.PermissionException extends RuntimeException implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.lib.account
- Class org.jbei.ice.lib.account.AccountTransfer extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - sessionId
```
String sessionId
```
    - email
```
String email
```
    - password
```
String password
```
    - initials
```
String initials
```
    - firstName
```
String firstName
```
    - lastName
```
String lastName
```
    - institution
```
String institution
```
    - description
```
String description
```
    - lastLogin
```
long lastLogin
```
    - registerDate
```
long registerDate
```
    - userEntryCount
```
long userEntryCount
```
    - visibleEntryCount
```
long visibleEntryCount
```
    - isAdmin
```
boolean isAdmin
```
    - newMessageCount
```
int newMessageCount
```
    - accountType
```
AccountType accountType
```
    - defaultPermissions
```
ArrayList<E> defaultPermissions
```
Package org.jbei.ice.lib.account.authentication
- Class org.jbei.ice.lib.account.authentication.AuthenticationException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
- Class org.jbei.ice.lib.account.authentication.InvalidCredentialsException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.lib.bulkupload
- Class org.jbei.ice.lib.bulkupload.BulkUploadAutoUpdate extends Object implements Serializable
  - Serialized Fields
    - keyValue
```
HashMap<K,V> keyValue
```
    - entryId
```
long entryId
```
    - bulkUploadId
```
long bulkUploadId
```
    - type
```
EntryType type
```
    - lastUpdate
```
Date lastUpdate
```
    - row
```
int row
```
    - editMode
```
EditMode editMode
```
- Class org.jbei.ice.lib.bulkupload.BulkUploadInfo extends AbstractFolder implements Serializable
  - Serialized Fields
    - name
```
String name
```
    - type
```
String type
```
    - count
```
int count
```
    - created
```
long created
```
    - lastUpdate
```
long lastUpdate
```
    - account
```
AccountTransfer account
```
    - status
```
BulkUploadStatus status
```
    - entryList
```
ArrayList<E> entryList
```
    - permissions
```
ArrayList<E> permissions
```
- Class org.jbei.ice.lib.bulkupload.ProcessedBulkUpload extends Object implements Serializable
  - Serialized Fields
    - success
```
boolean success
```
    - headers
```
List<E> headers
```
    - userMessage
```
String userMessage
```
    - uploadInfo
```
BulkUploadInfo uploadInfo
```
Package org.jbei.ice.lib.config
- Class org.jbei.ice.lib.config.SiteSettings extends Object implements Serializable
  - Serialized Fields
    - version
```
String version
```
    - assetName
```
String assetName
```
    - hasLogo
```
boolean hasLogo
```
    - hasLoginMessage
```
boolean hasLoginMessage
```
    - hasFooter
```
boolean hasFooter
```
Package org.jbei.ice.lib.dto
- Class org.jbei.ice.lib.dto.AccountResults extends Object implements Serializable
  - Serialized Fields
    - resultCount
```
long resultCount
```
    - users
```
LinkedList<E> users
```
- Class org.jbei.ice.lib.dto.Curation extends Object implements Serializable
  - Serialized Fields
    - exclude
```
boolean exclude
```
- Class org.jbei.ice.lib.dto.DNAFeature extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - type
```
String type
```
    - name
```
String name
```
    - strand
```
int strand
```
    - annotationType
```
String annotationType
```
    - uri
```
String uri
```
    - identifier
```
String identifier
```
    - notes
```
List<E> notes
```
    - locations
```
List<E> locations
```
    - sequence
```
String sequence
```
    - entries
```
List<E> entries
```
    - curation
```
Curation curation
```
- Class org.jbei.ice.lib.dto.DNAFeatureLocation extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - genbankStart
```
int genbankStart
```
    - end
```
int end
```
    - uri
```
String uri
```
- Class org.jbei.ice.lib.dto.DNAFeatureNote extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - name
```
String name
```
    - value
```
String value
```
    - quoted
```
boolean quoted
```
- Class org.jbei.ice.lib.dto.DNAFeatures extends Object implements Serializable
  - Serialized Fields
    - label
```
String label
```
    - features
```
List<E> features
```
- Class org.jbei.ice.lib.dto.DNASequence extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - sequence
```
String sequence
```
- Class org.jbei.ice.lib.dto.FeaturedDNASequence extends DNASequence implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - features
```
List<E> features
```
    - identifier
```
String identifier
```
    - name
```
String name
```
    - isCircular
```
boolean isCircular
```
    - description
```
String description
```
    - uri
```
String uri
```
    - dcUri
```
String dcUri
```
    - canEdit
```
boolean canEdit
```
    - length
```
long length
```
- Class org.jbei.ice.lib.dto.History extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - action
```
String action
```
    - userId
```
String userId
```
    - account
```
AccountTransfer account
```
    - partner
```
RegistryPartner partner
```
    - time
```
long time
```
- Class org.jbei.ice.lib.dto.Setting extends Object implements Serializable
  - Serialized Fields
    - key
```
String key
```
    - value
```
String value
```
- Class org.jbei.ice.lib.dto.ShotgunSequenceDTO extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - filename
```
String filename
```
    - call
```
String call
```
    - score
```
double score
```
    - fileId
```
String fileId
```
    - depositor
```
AccountTransfer depositor
```
    - created
```
long created
```
    - canEdit
```
boolean canEdit
```
- Class org.jbei.ice.lib.dto.StorageLocation extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - display
```
String display
```
    - type
```
SampleType type
```
    - child
```
StorageLocation child
```
    - name
```
String name
```
Package org.jbei.ice.lib.dto.access
- Class org.jbei.ice.lib.dto.access.AccessKey extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - account
```
AccountTransfer account
```
    - clientId
```
String clientId
```
    - secret
```
String secret
```
    - token
```
String token
```
    - creationTime
```
long creationTime
```
- Class org.jbei.ice.lib.dto.access.AccessPermission extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - type
```
AccessPermission.Type type
```
    - article
```
AccessPermission.Article article
```
    - typeId
```
long typeId
```
    - articleId
```
long articleId
```
    - display
```
String display
```
    - account
```
AccountTransfer account
```
    - group
```
UserGroup group
```
    - userId
```
String userId
```
    - secret
```
String secret
```
    - partner
```
RegistryPartner partner
```
- Class org.jbei.ice.lib.dto.access.RemoteAccessPermission extends AccessPermission implements Serializable
  - Serialized Fields
    - folderDetails
```
FolderDetails folderDetails
```
Package org.jbei.ice.lib.dto.bulkupload
- Class org.jbei.ice.lib.dto.bulkupload.PreferenceInfo extends Object implements Serializable
  - Serialized Fields
    - key
```
String key
```
    - value
```
String value
```
    - isAdd
```
boolean isAdd
```
Package org.jbei.ice.lib.dto.comment
- Class org.jbei.ice.lib.dto.comment.UserComment extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - accountTransfer
```
AccountTransfer accountTransfer
```
    - message
```
String message
```
    - commentDate
```
long commentDate
```
    - modified
```
long modified
```
    - entryId
```
long entryId
```
    - samples
```
ArrayList<E> samples
```
Package org.jbei.ice.lib.dto.common
- Class org.jbei.ice.lib.dto.common.Results extends Object implements Serializable
  - Serialized Fields
    - resultCount
```
long resultCount
```
    - data
```
List<E> data
```
Package org.jbei.ice.lib.dto.entry
- Class org.jbei.ice.lib.dto.entry.ArabidopsisSeedData extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - homozygosity
```
String homozygosity
```
    - ecotype
```
String ecotype
```
    - harvestDate
```
String harvestDate
```
    - seedParents
```
String seedParents
```
    - generation
```
Generation generation
```
    - plantType
```
PlantType plantType
```
    - sentToAbrc
```
Boolean sentToAbrc
```
- Class org.jbei.ice.lib.dto.entry.AttachmentInfo extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - filename
```
String filename
```
    - description
```
String description
```
    - fileId
```
String fileId
```
- Class org.jbei.ice.lib.dto.entry.CustomField extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - partId
```
long partId
```
    - name
```
String name
```
    - value
```
String value
```
- Class org.jbei.ice.lib.dto.entry.HasEntryData extends Object implements Serializable
  - Serialized Fields
    - entryInfo
```
PartData entryInfo
```
- Class org.jbei.ice.lib.dto.entry.ParsedEntryId extends Object implements Serializable
  - Serialized Fields
    - identifier
```
String identifier
```
    - partData
```
PartData partData
```
- Class org.jbei.ice.lib.dto.entry.PartData extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - id
```
long id
```
    - type
```
EntryType type
```
    - visible
```
Visibility visible
```
    - parents
```
ArrayList<E> parents
```
    - index
```
int index
```
    - recordId
```
String recordId
```
    - name
```
String name
```
    - owner
```
String owner
```
    - ownerEmail
```
String ownerEmail
```
    - ownerId
```
long ownerId
```
    - creator
```
String creator
```
    - creatorEmail
```
String creatorEmail
```
    - creatorId
```
long creatorId
```
    - alias
```
String alias
```
    - keywords
```
String keywords
```
    - status
```
String status
```
    - shortDescription
```
String shortDescription
```
    - longDescription
```
String longDescription
```
    - references
```
String references
```
    - creationTime
```
long creationTime
```
    - modificationTime
```
long modificationTime
```
    - bioSafetyLevel
```
Integer bioSafetyLevel
```
    - intellectualProperty
```
String intellectualProperty
```
    - partId
```
String partId
```
    - links
```
ArrayList<E> links
```
    - principalInvestigator
```
String principalInvestigator
```
    - principalInvestigatorEmail
```
String principalInvestigatorEmail
```
    - principalInvestigatorId
```
long principalInvestigatorId
```
    - selectionMarkers
```
ArrayList<E> selectionMarkers
```
    - fundingSource
```
String fundingSource
```
    - basePairCount
```
long basePairCount
```
    - featureCount
```
long featureCount
```
    - viewCount
```
long viewCount
```
    - hasAttachment
```
boolean hasAttachment
```
    - hasSample
```
boolean hasSample
```
    - hasSequence
```
boolean hasSequence
```
    - sequenceFileName
```
String sequenceFileName
```
    - hasOriginalSequence
```
boolean hasOriginalSequence
```
    - attachments
```
ArrayList<E> attachments
```
    - parameters
```
ArrayList<E> parameters
```
    - canEdit
```
boolean canEdit
```
    - accessPermissions
```
ArrayList<E> accessPermissions
```
    - publicRead
```
boolean publicRead
```
    - linkedParts
```
ArrayList<E> linkedParts
```
    - strainData
```
StrainData strainData
```
    - plasmidData
```
PlasmidData plasmidData
```
    - arabidopsisSeedData
```
ArabidopsisSeedData arabidopsisSeedData
```
- Class org.jbei.ice.lib.dto.entry.PartInformation extends Object implements Serializable
  - Serialized Fields
    - recordId
```
String recordId
```
    - name
```
String name
```
    - owner
```
String owner
```
    - ownerEmail
```
String ownerEmail
```
    - ownerId
```
long ownerId
```
    - creator
```
String creator
```
    - creatorEmail
```
String creatorEmail
```
    - creatorId
```
long creatorId
```
    - alias
```
String alias
```
    - keywords
```
String keywords
```
    - status
```
String status
```
    - shortDescription
```
String shortDescription
```
    - longDescription
```
String longDescription
```
    - references
```
String references
```
    - creationTime
```
long creationTime
```
    - modificationTime
```
long modificationTime
```
    - bioSafetyLevel
```
Integer bioSafetyLevel
```
    - intellectualProperty
```
String intellectualProperty
```
    - partId
```
String partId
```
    - links
```
ArrayList<E> links
```
    - principalInvestigator
```
String principalInvestigator
```
    - principalInvestigatorEmail
```
String principalInvestigatorEmail
```
    - selectionMarkers
```
ArrayList<E> selectionMarkers
```
    - fundingSource
```
String fundingSource
```
- Class org.jbei.ice.lib.dto.entry.PartStatistics extends Object implements Serializable
  - Serialized Fields
    - entryId
```
long entryId
```
    - sequenceCount
```
int sequenceCount
```
    - commentCount
```
int commentCount
```
    - sampleCount
```
int sampleCount
```
    - historyCount
```
int historyCount
```
    - experimentalDataCount
```
int experimentalDataCount
```
- Class org.jbei.ice.lib.dto.entry.PlasmidData extends Object implements Serializable
  - Serialized Fields
    - backbone
```
String backbone
```
    - originOfReplication
```
String originOfReplication
```
    - promoters
```
String promoters
```
    - circular
```
Boolean circular
```
    - replicatesIn
```
String replicatesIn
```
- Class org.jbei.ice.lib.dto.entry.SequenceInfo extends Object implements Serializable
  - Serialized Fields
    - filename
```
String filename
```
    - fileId
```
String fileId
```
    - sequence
```
DNASequence sequence
```
    - entryId
```
long entryId
```
    - format
```
SequenceFormat format
```
- Class org.jbei.ice.lib.dto.entry.StrainData extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - host
```
String host
```
    - genotypePhenotype
```
String genotypePhenotype
```
- Class org.jbei.ice.lib.dto.entry.TraceSequenceAlignmentInfo extends Object implements Serializable
  - Serialized Fields
    - score
```
int score
```
    - strand
```
int strand
```
    - queryStart
```
int queryStart
```
    - queryEnd
```
int queryEnd
```
    - subjectStart
```
int subjectStart
```
    - subjectEnd
```
int subjectEnd
```
    - queryAlignment
```
String queryAlignment
```
    - subjectAlignment
```
String subjectAlignment
```
- Class org.jbei.ice.lib.dto.entry.TraceSequenceAnalysis extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - filename
```
String filename
```
    - depositor
```
AccountTransfer depositor
```
    - created
```
long created
```
    - fileId
```
String fileId
```
    - sequence
```
String sequence
```
    - canEdit
```
boolean canEdit
```
    - traceSequenceAlignment
```
TraceSequenceAlignmentInfo traceSequenceAlignment
```
Package org.jbei.ice.lib.dto.folder
- Class org.jbei.ice.lib.dto.folder.FolderDetails extends AbstractFolder implements Serializable
  - Serialized Fields
    - folderName
```
String folderName
```
    - count
```
long count
```
    - description
```
String description
```
    - propagatePermission
```
boolean propagatePermission
```
    - type
```
FolderType type
```
    - owner
```
AccountTransfer owner
```
    - publicReadAccess
```
boolean publicReadAccess
```
    - canEdit
```
boolean canEdit
```
    - parent
```
FolderDetails parent
```
    - remotePartner
```
RegistryPartner remotePartner
```
Package org.jbei.ice.lib.dto.group
- Class org.jbei.ice.lib.dto.group.UserGroup extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - uuid
```
String uuid
```
    - label
```
String label
```
    - parentId
```
long parentId
```
    - description
```
String description
```
    - children
```
ArrayList<E> children
```
    - members
```
ArrayList<E> members
```
    - remoteMembers
```
ArrayList<E> remoteMembers
```
    - memberCount
```
long memberCount
```
    - type
```
GroupType type
```
    - ownerEmail
```
String ownerEmail
```
    - autoJoin
```
boolean autoJoin
```
    - creationTime
```
long creationTime
```
Package org.jbei.ice.lib.dto.message
- Class org.jbei.ice.lib.dto.message.MessageInfo extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - sent
```
long sent
```
    - from
```
String from
```
    - message
```
String message
```
    - title
```
String title
```
    - read
```
boolean read
```
    - userGroups
```
ArrayList<E> userGroups
```
    - accounts
```
ArrayList<E> accounts
```
Package org.jbei.ice.lib.dto.sample
- Class org.jbei.ice.lib.dto.sample.PartSample extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - depositor
```
AccountTransfer depositor
```
    - label
```
String label
```
    - creationTime
```
long creationTime
```
    - inCart
```
boolean inCart
```
    - location
```
StorageLocation location
```
    - partId
```
long partId
```
    - partName
```
String partName
```
    - canEdit
```
boolean canEdit
```
    - comments
```
ArrayList<E> comments
```
- Class org.jbei.ice.lib.dto.sample.SampleRequest extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - requester
```
AccountTransfer requester
```
    - requestType
```
SampleRequestType requestType
```
    - partData
```
PartData partData
```
    - status
```
SampleRequestStatus status
```
    - plateDescription
```
String plateDescription
```
    - requestTime
```
long requestTime
```
    - updateTime
```
long updateTime
```
    - growthTemperature
```
int growthTemperature
```
    - location
```
List<E> location
```
- Class org.jbei.ice.lib.dto.sample.UserSamples extends Object implements Serializable
  - Serialized Fields
    - count
```
int count
```
    - requests
```
ArrayList<E> requests
```
Package org.jbei.ice.lib.dto.search
- Class org.jbei.ice.lib.dto.search.BlastQuery extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - blastProgram
```
BlastProgram blastProgram
```
    - sequence
```
String sequence
```
- Class org.jbei.ice.lib.dto.search.FieldFilter extends Object implements Serializable
  - Serialized Fields
    - field
```
EntryField field
```
    - filter
```
String filter
```
- Class org.jbei.ice.lib.dto.search.SearchQuery extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - queryString
```
String queryString
```
    - blastQuery
```
BlastQuery blastQuery
```
    - bioSafetyOption
```
BioSafetyOption bioSafetyOption
```
    - entryTypes
```
ArrayList<E> entryTypes
```
    - parameters
```
SearchQuery.Parameters parameters
```
    - fieldFilters
```
ArrayList<E> fieldFilters
```
- Class org.jbei.ice.lib.dto.search.SearchQuery.Parameters extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - sortField
```
ColumnField sortField
```
    - sortAscending
```
boolean sortAscending
```
    - start
```
int start
```
    - retrieveCount
```
int retrieveCount
```
    - hasSequence
```
boolean hasSequence
```
    - hasAttachment
```
boolean hasAttachment
```
    - hasSample
```
boolean hasSample
```
- Class org.jbei.ice.lib.dto.search.SearchResult extends HasEntryData implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - eValue
```
String eValue
```
    - alignment
```
String alignment
```
    - queryLength
```
int queryLength
```
    - nident
```
int nident
```
    - score
```
float score
```
    - maxScore
```
float maxScore
```
    - matchDetails
```
LinkedList<E> matchDetails
```
    - partner
```
RegistryPartner partner
```
- Class org.jbei.ice.lib.dto.search.SearchResults extends Object implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - resultCount
```
long resultCount
```
    - results
```
LinkedList<E> results
```
    - query
```
SearchQuery query
```
Package org.jbei.ice.lib.dto.user
- Class org.jbei.ice.lib.dto.user.UserPreferences extends Object implements Serializable
  - Serialized Fields
    - userId
```
String userId
```
    - preferences
```
ArrayList<E> preferences
```
Package org.jbei.ice.lib.dto.web
- Class org.jbei.ice.lib.dto.web.PartnerEntries extends Object implements Serializable
  - Serialized Fields
    - partner
```
RegistryPartner partner
```
    - entries
```
Results<T extends IDataTransferModel> entries
```
- Class org.jbei.ice.lib.dto.web.RegistryPartner extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - status
```
RemotePartnerStatus status
```
    - name
```
String name
```
    - url
```
String url
```
    - apiKey
```
String apiKey
```
    - sent
```
long sent
```
    - fetched
```
long fetched
```
    - addTime
```
long addTime
```
    - lastContactTime
```
long lastContactTime
```
- Class org.jbei.ice.lib.dto.web.RemoteUser extends Object implements Serializable
  - Serialized Fields
    - partner
```
RegistryPartner partner
```
    - user
```
AccountTransfer user
```
- Class org.jbei.ice.lib.dto.web.WebOfRegistries extends Object implements Serializable
  - Serialized Fields
    - webEnabled
```
boolean webEnabled
```
    - partners
```
ArrayList<E> partners
```
Package org.jbei.ice.lib.entry
- Class org.jbei.ice.lib.entry.EntrySelection extends Object implements Serializable
  - Serialized Fields
    - all
```
boolean all
```
    - entryType
```
EntryType entryType
```
    - selectionType
```
EntrySelectionType selectionType
```
    - searchQuery
```
SearchQuery searchQuery
```
    - destination
```
ArrayList<E> destination
```
    - folderId
```
String folderId
```
    - entries
```
ArrayList<E> entries
```
    - remoteEntries
```
ArrayList<E> remoteEntries
```
Package org.jbei.ice.lib.entry.sequence.composers.formatters
- Class org.jbei.ice.lib.entry.sequence.composers.formatters.FormatterException extends Exception implements Serializable
  
  serialVersionUID:
  
  3317923989605978686L
Package org.jbei.ice.lib.experiment
- Class org.jbei.ice.lib.experiment.Study extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - partId
```
String partId
```
    - label
```
String label
```
    - url
```
String url
```
    - ownerEmail
```
String ownerEmail
```
    - created
```
long created
```
Package org.jbei.ice.lib.folder
- Class org.jbei.ice.lib.folder.AbstractFolder extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - creationTime
```
long creationTime
```
    - accessPermissions
```
List<E> accessPermissions
```
    - entries
```
List<E> entries
```
- Class org.jbei.ice.lib.folder.CollectionCounts extends Object implements Serializable
  - Serialized Fields
    - available
```
long available
```
    - personal
```
long personal
```
    - shared
```
long shared
```
    - deleted
```
long deleted
```
    - drafts
```
long drafts
```
    - pending
```
long pending
```
    - transferred
```
long transferred
```
Package org.jbei.ice.lib.manuscript
- Class org.jbei.ice.lib.manuscript.Manuscript extends Object implements Serializable
  - Serialized Fields
    - id
```
long id
```
    - title
```
String title
```
    - authorFirstName
```
String authorFirstName
```
    - authorLastName
```
String authorLastName
```
    - folder
```
FolderDetails folder
```
    - paragonUrl
```
String paragonUrl
```
    - status
```
ManuscriptStatus status
```
    - creationTime
```
long creationTime
```
    - zipFileName
```
String zipFileName
```
Package org.jbei.ice.lib.parsers
- Class org.jbei.ice.lib.parsers.InvalidFormatParserException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.lib.search
- Class org.jbei.ice.lib.search.IndexBuildStatus extends Object implements Serializable
  - Serialized Fields
    - done
```
long done
```
    - total
```
long total
```
- Class org.jbei.ice.lib.search.WebResult extends Object implements Serializable
  - Serialized Fields
    - partner
```
RegistryPartner partner
```
    - count
```
long count
```
    - results
```
List<E> results
```
- Class org.jbei.ice.lib.search.WebSearchResults extends Object implements Serializable
  - Serialized Fields
    - totalCount
```
long totalCount
```
    - results
```
List<E> results
```
    - query
```
SearchQuery query
```
Package org.jbei.ice.lib.search.blast
- Class org.jbei.ice.lib.search.blast.BlastException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
- Class org.jbei.ice.lib.search.blast.ProgramTookTooLongException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.lib.utils
- Class org.jbei.ice.lib.utils.UtilityException extends Exception implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.services.rest
- Class org.jbei.ice.services.rest.ErrorResponse extends Object implements Serializable
  - Serialized Fields
    - message
```
String message
```
Package org.jbei.ice.servlet
- Class org.jbei.ice.servlet.SBOLVisualDownloadServlet extends javax.servlet.http.HttpServlet implements Serializable
  
  serialVersionUID:
  
  1L
Package org.jbei.ice.storage
- Class org.jbei.ice.storage.DAOException extends RuntimeException implements Serializable
  
  serialVersionUID:
  
  1L

Serialized Form

Package org.jbei.auth

Class org.jbei.auth.MemoryKeyTable extends HashMap<String,Key> implements Serializable

Package org.jbei.ice.lib.access

Class org.jbei.ice.lib.access.AuthorizationException extends RuntimeException implements Serializable

Class org.jbei.ice.lib.access.PermissionException extends RuntimeException implements Serializable

Package org.jbei.ice.lib.account

Class org.jbei.ice.lib.account.AccountTransfer extends Object implements Serializable

Serialized Fields

id

sessionId

email

password

initials

firstName

lastName

institution

description

lastLogin

registerDate

userEntryCount

visibleEntryCount

isAdmin

newMessageCount

accountType

defaultPermissions

Package org.jbei.ice.lib.account.authentication

Class org.jbei.ice.lib.account.authentication.AuthenticationException extends Exception implements Serializable

Class org.jbei.ice.lib.account.authentication.InvalidCredentialsException extends Exception implements Serializable

Package org.jbei.ice.lib.bulkupload

Class org.jbei.ice.lib.bulkupload.BulkUploadAutoUpdate extends Object implements Serializable

Serialized Fields

keyValue

entryId

bulkUploadId

type

lastUpdate

row

editMode

Class org.jbei.ice.lib.bulkupload.BulkUploadInfo extends AbstractFolder implements Serializable

Serialized Fields

name

type

count

created

lastUpdate

account

status

entryList

permissions

Class org.jbei.ice.lib.bulkupload.ProcessedBulkUpload extends Object implements Serializable

Serialized Fields

success

headers

userMessage

uploadInfo

Package org.jbei.ice.lib.config

Class org.jbei.ice.lib.config.SiteSettings extends Object implements Serializable

Serialized Fields

version

assetName

hasLogo

hasLoginMessage

hasFooter

Package org.jbei.ice.lib.dto

Class org.jbei.ice.lib.dto.AccountResults extends Object implements Serializable

Serialized Fields

resultCount

users

Class org.jbei.ice.lib.dto.Curation extends Object implements Serializable

Serialized Fields

exclude

Class org.jbei.ice.lib.dto.DNAFeature extends Object implements Serializable

Serialized Fields

id

type

name

strand

annotationType

uri