PartData (ice 5.3.1 API)

java.lang.Object
- org.jbei.ice.lib.dto.entry.PartData

All Implemented Interfaces:

Serializable, IDataTransferModel
```
public class PartData
extends Object
implements IDataTransferModel
```
Data transfer object for parts and associated meta-data

Author:

Hector Plahar

See Also:

Serialized Form

Constructor Summary

Constructors
Constructor and Description

PartData(EntryType type)

Constructors
Constructor and Description
`PartData(EntryType type)`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`ArrayList<AccessPermission>`	`getAccessPermissions()`
`String`	`getAlias()`
`ArabidopsisSeedData`	`getArabidopsisSeedData()`
`ArrayList<AttachmentInfo>`	`getAttachments()`
`long`	`getBasePairCount()`
`Integer`	`getBioSafetyLevel()`
`long`	`getCreationTime()`
`String`	`getCreator()`
`String`	`getCreatorEmail()`
`long`	`getCreatorId()`
`ArrayList<CustomField>`	`getCustomFields()`
`long`	`getFeatureCount()`
`String`	`getFundingSource()`
`long`	`getId()`
`int`	`getIndex()`
`String`	`getIntellectualProperty()`
`String`	`getKeywords()`
`ArrayList<PartData>`	`getLinkedParts()`
`ArrayList<String>`	`getLinks()`
`String`	`getLongDescription()`
`long`	`getModificationTime()`
`String`	`getName()`
`String`	`getOwner()`
`String`	`getOwnerEmail()`
`long`	`getOwnerId()`
`ArrayList<PartData>`	`getParents()`
`String`	`getPartId()`
`PlasmidData`	`getPlasmidData()`
`String`	`getPrincipalInvestigator()`
`String`	`getPrincipalInvestigatorEmail()`
`long`	`getPrincipalInvestigatorId()`
`String`	`getRecordId()`
`String`	`getReferences()`
`ArrayList<String>`	`getSelectionMarkers()`
`String`	`getSequenceFileName()`
`String`	`getShortDescription()`
`String`	`getStatus()`
`StrainData`	`getStrainData()`
`EntryType`	`getType()`
`long`	`getViewCount()`
`Visibility`	`getVisibility()`
`boolean`	`isCanEdit()`
`boolean`	`isHasAttachment()`
`boolean`	`isHasOriginalSequence()`
`boolean`	`isHasSample()`
`boolean`	`isHasSequence()`
`boolean`	`isPublicRead()`
`void`	`setAccessPermissions(ArrayList<AccessPermission> accessPermissions)`
`void`	`setAlias(String alias)`
`void`	`setArabidopsisSeedData(ArabidopsisSeedData arabidopsisSeedData)`
`void`	`setAttachments(ArrayList<AttachmentInfo> attachments)`
`void`	`setBasePairCount(long basePairCount)`
`void`	`setBioSafetyLevel(Integer bioSafetyLevel)`
`void`	`setCanEdit(boolean canEdit)`
`void`	`setCreationTime(long creationTime)`
`void`	`setCreator(String creator)`
`void`	`setCreatorEmail(String creatorEmail)`
`void`	`setCreatorId(long creatorId)`
`void`	`setCustomFields(ArrayList<CustomField> parameters)`
`void`	`setFeatureCount(long featureCount)`
`void`	`setFundingSource(String fundingSource)`
`void`	`setHasAttachment(boolean hasAttachment)`
`void`	`setHasOriginalSequence(boolean hasOriginalSequence)`
`void`	`setHasSample(boolean hasSample)`
`void`	`setHasSequence(boolean hasSequence)`
`void`	`setId(long id)`
`void`	`setIndex(int index)`
`void`	`setIntellectualProperty(String intellectualProperty)`
`void`	`setKeywords(String keywords)`
`void`	`setLinks(ArrayList<String> links)`
`void`	`setLongDescription(String longDescription)`
`void`	`setModificationTime(long modificationTime)`
`void`	`setName(String name)`
`void`	`setOwner(String owner)`
`void`	`setOwnerEmail(String ownerEmail)`
`void`	`setOwnerId(long ownerId)`
`void`	`setPartId(String partId)`
`void`	`setPlasmidData(PlasmidData plasmidData)`
`void`	`setPrincipalInvestigator(String principalInvestigator)`
`void`	`setPrincipalInvestigatorEmail(String principalInvestigatorEmail)`
`void`	`setPrincipalInvestigatorId(long principalInvestigatorId)`
`void`	`setPublicRead(boolean publicRead)`
`void`	`setRecordId(String recordId)`
`void`	`setReferences(String references)`
`void`	`setSelectionMarkers(ArrayList<String> selectionMarkers)`
`void`	`setSequenceFileName(String sequenceFileName)`
`void`	`setShortDescription(String shortDescription)`
`void`	`setStatus(String status)`
`void`	`setStrainData(StrainData strainData)`
`void`	`setType(EntryType type)`
`void`	`setViewCount(long viewCount)`
`void`	`setVisibility(Visibility visible)`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- PartData
```
public PartData(EntryType type)
```

Method Detail

getRecordId
```
public String getRecordId()
```

setRecordId

public void setRecordId(String recordId)

getType
```
public EntryType getType()
```

setType
```
public void setType(EntryType type)
```

getOwner
```
public String getOwner()
```

setOwner
```
public void setOwner(String owner)
```

getOwnerEmail
```
public String getOwnerEmail()
```

setOwnerEmail

public void setOwnerEmail(String ownerEmail)

getCreator
```
public String getCreator()
```

setCreator

public void setCreator(String creator)

getCreatorEmail
```
public String getCreatorEmail()
```

setCreatorEmail

public void setCreatorEmail(String creatorEmail)

getStatus
```
public String getStatus()
```

setStatus
```
public void setStatus(String status)
```

getAlias
```
public String getAlias()
```

setAlias
```
public void setAlias(String alias)
```

getKeywords
```
public String getKeywords()
```

setKeywords

public void setKeywords(String keywords)

getShortDescription
```
public String getShortDescription()
```

setShortDescription

public void setShortDescription(String shortDescription)

getLongDescription
```
public String getLongDescription()
```

setLongDescription

public void setLongDescription(String longDescription)

getReferences
```
public String getReferences()
```

setReferences

public void setReferences(String references)

getCreationTime
```
public long getCreationTime()
```
Returns:

number of millisecs since the epoch when part was recorded

setCreationTime

public void setCreationTime(long creationTime)

getModificationTime
```
public long getModificationTime()
```
Returns:

number of millisecs since epoch when part was updated

setModificationTime

public void setModificationTime(long modificationTime)

setBioSafetyLevel

public void setBioSafetyLevel(Integer bioSafetyLevel)

getBioSafetyLevel
```
public Integer getBioSafetyLevel()
```

setIntellectualProperty

public void setIntellectualProperty(String intellectualProperty)

getIntellectualProperty

public String getIntellectualProperty()

getName
```
public String getName()
```

setName
```
public void setName(String name)
```

getPartId
```
public String getPartId()
```

setPartId
```
public void setPartId(String partId)
```

getPrincipalInvestigator

public String getPrincipalInvestigator()

setPrincipalInvestigator

public void setPrincipalInvestigator(String principalInvestigator)

getCustomFields

public ArrayList<CustomField> getCustomFields()

setCustomFields

public void setCustomFields(ArrayList<CustomField> parameters)

getFundingSource
```
public String getFundingSource()
```

setFundingSource

public void setFundingSource(String fundingSource)

isHasAttachment
```
public boolean isHasAttachment()
```

setHasAttachment

public void setHasAttachment(boolean hasAttachment)

isHasSample
```
public boolean isHasSample()
```

setHasSample

public void setHasSample(boolean hasSample)

isHasSequence
```
public boolean isHasSequence()
```

setHasSequence

public void setHasSequence(boolean hasSequence)

getId
```
public long getId()
```

setId
```
public void setId(long id)
```

isCanEdit
```
public boolean isCanEdit()
```

setCanEdit

public void setCanEdit(boolean canEdit)

getVisibility
```
public Visibility getVisibility()
```

setVisibility

public void setVisibility(Visibility visible)

getOwnerId
```
public long getOwnerId()
```

setOwnerId
```
public void setOwnerId(long ownerId)
```

getCreatorId
```
public long getCreatorId()
```

setCreatorId

public void setCreatorId(long creatorId)

isHasOriginalSequence

public boolean isHasOriginalSequence()

setHasOriginalSequence

public void setHasOriginalSequence(boolean hasOriginalSequence)

isPublicRead
```
public boolean isPublicRead()
```

setPublicRead

public void setPublicRead(boolean publicRead)

getLinkedParts
```
public ArrayList<PartData> getLinkedParts()
```
Returns:

the list of parts that this part links to.

getPrincipalInvestigatorEmail

public String getPrincipalInvestigatorEmail()

setPrincipalInvestigatorEmail

public void setPrincipalInvestigatorEmail(String principalInvestigatorEmail)

getPrincipalInvestigatorId

public long getPrincipalInvestigatorId()

setPrincipalInvestigatorId

public void setPrincipalInvestigatorId(long principalInvestigatorId)

getAccessPermissions

public ArrayList<AccessPermission> getAccessPermissions()

getAttachments

public ArrayList<AttachmentInfo> getAttachments()

setAttachments

public void setAttachments(ArrayList<AttachmentInfo> attachments)

setAccessPermissions

public void setAccessPermissions(ArrayList<AccessPermission> accessPermissions)

getSelectionMarkers

public ArrayList<String> getSelectionMarkers()

setSelectionMarkers

public void setSelectionMarkers(ArrayList<String> selectionMarkers)

getLinks
```
public ArrayList<String> getLinks()
```

setLinks

public void setLinks(ArrayList<String> links)

getParents

public ArrayList<PartData> getParents()

getStrainData
```
public StrainData getStrainData()
```

setStrainData

public void setStrainData(StrainData strainData)

getPlasmidData
```
public PlasmidData getPlasmidData()
```

setPlasmidData

public void setPlasmidData(PlasmidData plasmidData)

getArabidopsisSeedData

public ArabidopsisSeedData getArabidopsisSeedData()

setArabidopsisSeedData

public void setArabidopsisSeedData(ArabidopsisSeedData arabidopsisSeedData)

getBasePairCount
```
public long getBasePairCount()
```

setBasePairCount

public void setBasePairCount(long basePairCount)

getFeatureCount
```
public long getFeatureCount()
```

getViewCount
```
public long getViewCount()
```

setViewCount

public void setViewCount(long viewCount)

setFeatureCount

public void setFeatureCount(long featureCount)

getIndex
```
public int getIndex()
```

setIndex
```
public void setIndex(int index)
```

getSequenceFileName
```
public String getSequenceFileName()
```

setSequenceFileName

public void setSequenceFileName(String sequenceFileName)

Class PartData

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

PartData

Method Detail

getRecordId

setRecordId

getType

setType

getOwner

setOwner

getOwnerEmail

setOwnerEmail

getCreator

setCreator

getCreatorEmail

setCreatorEmail

getStatus

setStatus

getAlias

setAlias

getKeywords

setKeywords

getShortDescription

setShortDescription

getLongDescription

setLongDescription

getReferences

setReferences

getCreationTime

setCreationTime

getModificationTime

setModificationTime

setBioSafetyLevel

getBioSafetyLevel

setIntellectualProperty

getIntellectualProperty

getName

setName

getPartId

setPartId

getPrincipalInvestigator

setPrincipalInvestigator

getCustomFields

setCustomFields

getFundingSource

setFundingSource

isHasAttachment

setHasAttachment

isHasSample

setHasSample

isHasSequence

setHasSequence

getId

setId

isCanEdit

setCanEdit

getVisibility

setVisibility

getOwnerId

setOwnerId

getCreatorId

setCreatorId

isHasOriginalSequence

setHasOriginalSequence

isPublicRead

setPublicRead

getLinkedParts

getPrincipalInvestigatorEmail

setPrincipalInvestigatorEmail

getPrincipalInvestigatorId

setPrincipalInvestigatorId

getAccessPermissions

getAttachments

setAttachments

setAccessPermissions

getSelectionMarkers

setSelectionMarkers