org.jbei.ice.lib.entry.sequence

Enum SequenceFormat

java.lang.Object

java.lang.Enum<SequenceFormat>

org.jbei.ice.lib.entry.sequence.SequenceFormat

All Implemented Interfaces:

Serializable, Comparable<SequenceFormat>

public enum SequenceFormat
extends Enum<SequenceFormat>

Different sequence formats supported by ICE

Author:

Hector Plahar

Enum Constant Summary

Enum Constants

Enum Constant and Description
FASTA
GENBANK
ORIGINAL
PIGEONI
PIGEONS
PLAIN
SBOL1
SBOL2

Method Summary

Modifier and Type	Method and Description
static SequenceFormat	fromString(String type)
static SequenceFormat	valueOf(String name) Returns the enum constant of this type with the specified name.
static SequenceFormat[]	values() Returns an array containing the constants of this enum type, in the order they are declared.

Methods inherited from class java.lang.Enum

clone, compareTo, equals, finalize, getDeclaringClass, hashCode, name, ordinal, toString, valueOf

Methods inherited from class java.lang.Object

getClass, notify, notifyAll, wait, wait, wait

Enum Constant Detail

ORIGINAL

public static final SequenceFormat ORIGINAL

FASTA

public static final SequenceFormat FASTA

SBOL1

public static final SequenceFormat SBOL1

SBOL2

public static final SequenceFormat SBOL2

PLAIN

public static final SequenceFormat PLAIN

PIGEONI

public static final SequenceFormat PIGEONI

PIGEONS

public static final SequenceFormat PIGEONS

GENBANK

public static final SequenceFormat GENBANK

Method Detail

values

public static SequenceFormat[] values()

Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows:

for (SequenceFormat c : SequenceFormat.values())
    System.out.println(c);

Returns:

an array containing the constants of this enum type, in the order they are declared

valueOf

public static SequenceFormat valueOf(String name)

Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)

Parameters:

name - the name of the enum constant to be returned.

Returns:

the enum constant with the specified name

Throws:

IllegalArgumentException - if this enum type has no constant with the specified name

NullPointerException - if the argument is null

fromString

public static SequenceFormat fromString(String type)