org.jbei.ice.lib.dto

Class FeaturedDNASequence

java.lang.Object

org.jbei.ice.lib.dto.DNASequence

org.jbei.ice.lib.dto.FeaturedDNASequence

All Implemented Interfaces:

Serializable, IDataTransferModel

public class FeaturedDNASequence
extends DNASequence

Value object to hold DNAFeatures and some genbank file information.

Author:

Zinovii Dmytriv

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
FeaturedDNASequence()
FeaturedDNASequence(String sequence, List<DNAFeature> features)
FeaturedDNASequence(String sequence, String name, boolean isCircular, List<DNAFeature> features, String identifier)

Method Summary

Modifier and Type	Method and Description
String	getDcUri()
String	getDescription()
List<DNAFeature>	getFeatures()
String	getIdentifier()
boolean	getIsCircular()
long	getLength()
String	getName()
String	getUri()
boolean	isCanEdit()
void	setCanEdit(boolean canEdit)
void	setDcUri(String dcUri)
void	setDescription(String description)
void	setFeatures(List<DNAFeature> features)
void	setIdentifier(String identifier)
void	setIsCircular(boolean isCircular)
void	setLength(long length)
void	setName(String name)
void	setUri(String uri)

Methods inherited from class org.jbei.ice.lib.dto.DNASequence

getSequence, setSequence

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

FeaturedDNASequence

public FeaturedDNASequence()

FeaturedDNASequence

public FeaturedDNASequence(String sequence,
                           List<DNAFeature> features)

FeaturedDNASequence

public FeaturedDNASequence(String sequence,
                           String name,
                           boolean isCircular,
                           List<DNAFeature> features,
                           String identifier)

Method Detail

getFeatures

public List<DNAFeature> getFeatures()

setFeatures

public void setFeatures(List<DNAFeature> features)

getIdentifier

public String getIdentifier()

setIdentifier

public void setIdentifier(String identifier)

getName

public String getName()

setName

public void setName(String name)

getIsCircular

public boolean getIsCircular()

setIsCircular

public void setIsCircular(boolean isCircular)

getDescription

public String getDescription()

setDescription

public void setDescription(String description)

getUri

public String getUri()

setUri

public void setUri(String uri)

getDcUri

public String getDcUri()

setDcUri

public void setDcUri(String dcUri)

isCanEdit

public boolean isCanEdit()

setCanEdit

public void setCanEdit(boolean canEdit)

getLength

public long getLength()

setLength

public void setLength(long length)