Uses of Class
org.jbei.ice.storage.model.ShotgunSequence

Packages that use ShotgunSequence

Package	Description
org.jbei.ice.lib.dto	Value Objects classes.
org.jbei.ice.lib.entry.sequence
org.jbei.ice.storage.hibernate.dao

Uses of ShotgunSequence in org.jbei.ice.lib.dto

Constructors in org.jbei.ice.lib.dto with parameters of type ShotgunSequence

Constructor and Description
ShotgunSequenceDTO(ShotgunSequence s)

Uses of ShotgunSequence in org.jbei.ice.lib.entry.sequence

Methods in org.jbei.ice.lib.entry.sequence with parameters of type ShotgunSequence

Modifier and Type	Method and Description
void	SequenceAnalysisController.removeShotgunSequence(ShotgunSequence shotgunSequence)

Uses of ShotgunSequence in org.jbei.ice.storage.hibernate.dao

Methods in org.jbei.ice.storage.hibernate.dao that return ShotgunSequence

Modifier and Type	Method and Description
ShotgunSequence	ShotgunSequenceDAO.create(String fileName, String depositor, Entry entry, String fileUUID, Date date)
ShotgunSequence	ShotgunSequenceDAO.get(long id)
ShotgunSequence	ShotgunSequenceDAO.getByFileId(String fileId)

Methods in org.jbei.ice.storage.hibernate.dao that return types with arguments of type ShotgunSequence

Modifier and Type	Method and Description
List<ShotgunSequence>	ShotgunSequenceDAO.getByEntry(Entry entry)

Methods in org.jbei.ice.storage.hibernate.dao with parameters of type ShotgunSequence

Modifier and Type	Method and Description
void	ShotgunSequenceDAO.delete(Path dir, ShotgunSequence shotgunSequence)