org.jbei.ice.storage.hibernate.dao

Class SequenceFeatureDAO

java.lang.Object

org.jbei.ice.storage.hibernate.HibernateRepository<SequenceFeature>

org.jbei.ice.storage.hibernate.dao.SequenceFeatureDAO

All Implemented Interfaces:

IRepository<SequenceFeature>

public class SequenceFeatureDAO
extends HibernateRepository<SequenceFeature>

Hibernate Data accessor object for SequenceFeatures

Author:

Hector Plahar

Constructor Summary

Constructors

Constructor and Description
SequenceFeatureDAO()

Method Summary

Modifier and Type	Method and Description
SequenceFeature	get(long id)
List<SequenceFeature>	getByFeature(Feature feature)
List<Long>	getEntryIdsByFeature(Feature feature)
List<SequenceFeature>	getEntrySequenceFeatures(Entry entry)
int	getFeatureCount(Entry entry)
List<SequenceFeature>	getSequenceFeatures(String userId, List<Group> groups, String nameFilter, int start, int limit)
int	getSequenceFeaturesCount(String userId, List<Group> groups, String nameFilter)

Methods inherited from class org.jbei.ice.storage.hibernate.HibernateRepository

create, currentSession, delete, get, getBuilder, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

SequenceFeatureDAO

public SequenceFeatureDAO()

Method Detail

get

public SequenceFeature get(long id)

getEntryIdsByFeature

public List<Long> getEntryIdsByFeature(Feature feature)

getByFeature

public List<SequenceFeature> getByFeature(Feature feature)

getFeatureCount

public int getFeatureCount(Entry entry)

getEntrySequenceFeatures

public List<SequenceFeature> getEntrySequenceFeatures(Entry entry)

getSequenceFeatures

public List<SequenceFeature> getSequenceFeatures(String userId,
                                                 List<Group> groups,
                                                 String nameFilter,
                                                 int start,
                                                 int limit)

getSequenceFeaturesCount

public int getSequenceFeaturesCount(String userId,
                                    List<Group> groups,
                                    String nameFilter)