Uses of Package
org.jbei.ice.lib.dto

Packages that use org.jbei.ice.lib.dto

Package	Description
org.jbei.ice.lib.account
org.jbei.ice.lib.bulkupload
org.jbei.ice.lib.config
org.jbei.ice.lib.dto	Value Objects classes.
org.jbei.ice.lib.dto.entry
org.jbei.ice.lib.dto.sample
org.jbei.ice.lib.dto.web
org.jbei.ice.lib.entry
org.jbei.ice.lib.entry.sample
org.jbei.ice.lib.entry.sequence
org.jbei.ice.lib.entry.sequence.annotation
org.jbei.ice.lib.net
org.jbei.ice.lib.parsers	Parsers for different file formats.
org.jbei.ice.lib.parsers.fasta	Parser for fasta.
org.jbei.ice.lib.parsers.genbank
org.jbei.ice.lib.parsers.sbol
org.jbei.ice.lib.search.blast	BLAST search classes.
org.jbei.ice.lib.utils	Non-web related utility classes.
org.jbei.ice.services.rest
org.jbei.ice.storage.hibernate.dao
org.jbei.ice.storage.model	Data models for ice objects.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.account

Class and Description
AccountResults Wrapper around a list of user accounts

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.bulkupload

Class and Description
DNAFeature Data transfer object for Sequence Features

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.config

Class and Description
ConfigurationKey Types of configuration stored in the database.
Setting POJO for site-wide Configuration setting

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.dto

Class and Description
AuditType
ConfigurationKey Types of configuration stored in the database.
Curation
DNAFeature Data transfer object for Sequence Features
DNAFeatureLocation Value object to hold AnnotationLocation data.
DNAFeatureNote Value object to hold SequenceFeatureAttribute data.
DNASequence Value object to hold DNA sequence.
StorageLocation Storage location information that specifies display (which can be a unique identifier) and the location type (e.g.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.dto.entry

Class and Description
DNASequence Value object to hold DNA sequence.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.dto.sample

Class and Description
StorageLocation Storage location information that specifies display (which can be a unique identifier) and the location type (e.g.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.dto.web

Class and Description
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.entry

Class and Description
History

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.entry.sample

Class and Description
StorageLocation Storage location information that specifies display (which can be a unique identifier) and the location type (e.g.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.entry.sequence

Class and Description
DNASequence Value object to hold DNA sequence.
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.entry.sequence.annotation

Class and Description
DNAFeature Data transfer object for Sequence Features
DNAFeatures Wrapper around a list of DNAFeatures that have the same label
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.net

Class and Description
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.parsers

Class and Description
DNASequence Value object to hold DNA sequence.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.parsers.fasta

Class and Description
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.parsers.genbank

Class and Description
DNAFeature Data transfer object for Sequence Features
DNASequence Value object to hold DNA sequence.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.parsers.sbol

Class and Description
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.search.blast

Class and Description
DNAFeature Data transfer object for Sequence Features

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.lib.utils

Class and Description
ConfigurationKey Types of configuration stored in the database.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.services.rest

Class and Description
DNAFeature Data transfer object for Sequence Features
FeaturedDNASequence Value object to hold DNAFeatures and some genbank file information.
Setting POJO for site-wide Configuration setting
ShotgunSequenceDTO

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.storage.hibernate.dao

Class and Description
ConfigurationKey Types of configuration stored in the database.

Classes in org.jbei.ice.lib.dto used by org.jbei.ice.storage.model

Class and Description
Curation
DNAFeature Data transfer object for Sequence Features
History
Setting POJO for site-wide Configuration setting
ShotgunSequenceDTO
StorageLocation Storage location information that specifies display (which can be a unique identifier) and the location type (e.g.