org.jbei.ice.lib.bulkupload

Class BulkEntryCreator

java.lang.Object

org.jbei.ice.lib.bulkupload.BulkEntryCreator

public class BulkEntryCreator
extends Object

Creates entries for bulk uploads

Author:

Hector Plahar

Constructor Summary

Constructors

Constructor and Description
BulkEntryCreator()

Method Summary

Modifier and Type	Method and Description
protected void	addWritePermission(Account account, Entry entry)
long	createBulkUpload(String userId, EntryType entryType)
boolean	createEntries(String userId, long draftId, List<PartWithSample> data, HashMap<String,InputStream> files)
PartData	createEntry(String userId, long bulkUploadId, PartData data)
protected PartData	createEntryForUpload(String userId, PartData data, BulkUpload upload)
protected BulkUpload	createOrRetrieveBulkUpload(Account account, BulkUploadAutoUpdate autoUpdate, EntryType addType)
BulkUploadInfo	createOrUpdateEntries(String userId, long draftId, List<PartData> data)
BulkUploadAutoUpdate	createOrUpdateEntry(String userId, BulkUploadAutoUpdate autoUpdate, EntryType addType) Creates (or updates) entry based on information in parameters
protected PartData	doUpdate(String userId, Entry entry, PartData data)
BulkUploadInfo	renameBulkUpload(String userId, long id, String name) Renames the bulk upload referenced by the id in the parameter
protected void	saveFiles(PartData data, Entry entry, HashMap<String,InputStream> files)
protected ProcessedBulkUpload	submitBulkImportDraft(String userId, BulkUpload draft, ProcessedBulkUpload processedBulkUpload) Submits a bulk import that has been saved.
PartData	updateEntry(String userId, long bulkUploadId, long id, PartData data)
ProcessedBulkUpload	updateStatus(String userId, long id, BulkUploadStatus status)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BulkEntryCreator

public BulkEntryCreator()

Method Detail

createOrRetrieveBulkUpload

protected BulkUpload createOrRetrieveBulkUpload(Account account,
                                                BulkUploadAutoUpdate autoUpdate,
                                                EntryType addType)

createBulkUpload

public long createBulkUpload(String userId,
                             EntryType entryType)

createEntry

public PartData createEntry(String userId,
                            long bulkUploadId,
                            PartData data)

createEntryForUpload

protected PartData createEntryForUpload(String userId,
                                        PartData data,
                                        BulkUpload upload)

updateEntry

public PartData updateEntry(String userId,
                            long bulkUploadId,
                            long id,
                            PartData data)

doUpdate

protected PartData doUpdate(String userId,
                            Entry entry,
                            PartData data)

updateStatus

public ProcessedBulkUpload updateStatus(String userId,
                                        long id,
                                        BulkUploadStatus status)

submitBulkImportDraft

protected ProcessedBulkUpload submitBulkImportDraft(String userId,
                                                    BulkUpload draft,
                                                    ProcessedBulkUpload processedBulkUpload)
                                             throws PermissionException

Submits a bulk import that has been saved. This action is restricted to the owner of the draft or to administrators.

Throws:

PermissionException

renameBulkUpload

public BulkUploadInfo renameBulkUpload(String userId,
                                       long id,
                                       String name)

Renames the bulk upload referenced by the id in the parameter

Parameters:

userId - unique identifier of user performing action. Must with be an administrator own the bulk upload

id - unique identifier referencing the bulk upload

name - name to assign to the bulk upload

Returns:

data transfer object for the bulk upload. returns null if no

Throws:

AuthorizationException - is user performing action doesn't have privileges

createOrUpdateEntry

public BulkUploadAutoUpdate createOrUpdateEntry(String userId,
                                                BulkUploadAutoUpdate autoUpdate,
                                                EntryType addType)

Creates (or updates) entry based on information in parameters

Parameters:

userId - unique identifier for user making request

autoUpdate - wrapper for information used to create entry

addType - type of entry being created

Returns:

updated wrapper for information used to create entry. Will contain additional information such as the unique identifier for the part, if one was created

createOrUpdateEntries

public BulkUploadInfo createOrUpdateEntries(String userId,
                                            long draftId,
                                            List<PartData> data)

addWritePermission

protected void addWritePermission(Account account,
                                  Entry entry)

createEntries

public boolean createEntries(String userId,
                             long draftId,
                             List<PartWithSample> data,
                             HashMap<String,InputStream> files)

saveFiles

protected void saveFiles(PartData data,
                         Entry entry,
                         HashMap<String,InputStream> files)